Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2OQ9C0C9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2OQ9C0C9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.97■□□□□ 0.79
UBE2OQ9C0C9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBE2OQ9C0C9 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.97■□□□□ 0.79
UBE2OQ9C0C9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC254562.1-201ENST00000417586 456 ntBASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC009533.2-201ENST00000543664 586 ntBASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AP002472.1-201ENST00000577490 586 ntBASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC025062.2-201ENST00000605477 670 ntBASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2OQ9C0C9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 AP002414.3-201ENST00000589352 1468 ntBASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2OQ9C0C9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 INTS4P1-201ENST00000438455 1935 ntBASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 MIR4469-201ENST00000583919 79 ntBASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms