Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 AC026310.3-201ENST00000625186 2373 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.86■□□□□ 0.61
CDX2Q99626 CNN2P2-201ENST00000443536 909 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 CNN2P3-201ENST00000450201 906 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDX2Q99626 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.86■□□□□ 0.61
CDX2Q99626 AC051619.7-201ENST00000568314 623 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
CDX2Q99626 AC023141.13-201ENST00000604991 943 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 AL136317.3-201ENST00000618497 906 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.86■□□□□ 0.61
CDX2Q99626 AC073314.1-201ENST00000568729 2216 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX2Q99626 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDX2Q99626 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX2Q99626 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX2Q99626 IRX1P1-201ENST00000438849 1838 ntBASIC18.86■□□□□ 0.61
CDX2Q99626 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
CDX2Q99626 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 NME2P1-201ENST00000426182 414 ntBASIC18.85■□□□□ 0.61
CDX2Q99626 DDX43P3-201ENST00000441064 443 ntBASIC18.85■□□□□ 0.61
CDX2Q99626 ATP5G2P4-201ENST00000442175 420 ntBASIC18.85■□□□□ 0.61
CDX2Q99626 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.85■□□□□ 0.61
CDX2Q99626 CRB3P1-201ENST00000449338 276 ntBASIC18.85■□□□□ 0.61
CDX2Q99626 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.85■□□□□ 0.61
CDX2Q99626 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.85■□□□□ 0.61
CDX2Q99626 AC027307.3-201ENST00000594262 1100 ntBASIC18.85■□□□□ 0.61
CDX2Q99626 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDX2Q99626 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX2Q99626 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CDX2Q99626 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.84■□□□□ 0.61
CDX2Q99626 AL627223.1-201ENST00000416693 442 ntBASIC18.84■□□□□ 0.61
CDX2Q99626 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.84■□□□□ 0.61
CDX2Q99626 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDX2Q99626 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDX2Q99626 AC084346.2-201ENST00000607097 949 ntBASIC18.84■□□□□ 0.61
CDX2Q99626 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.84■□□□□ 0.61
CDX2Q99626 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDX2Q99626 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX2Q99626 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.83■□□□□ 0.61
CDX2Q99626 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDX2Q99626 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDX2Q99626 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CDX2Q99626 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDX2Q99626 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDX2Q99626 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.83■□□□□ 0.6
CDX2Q99626 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDX2Q99626 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.83■□□□□ 0.6
CDX2Q99626 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.83■□□□□ 0.6
CDX2Q99626 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.83■□□□□ 0.6
CDX2Q99626 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms