Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 C20orf181-201ENST00000623918 480 ntBASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AC125634.1-201ENST00000438758 1403 ntBASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AC005082.1-201ENST00000413042 2259 ntBASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD1Q96PZ7 AC034236.2-201ENST00000606662 1610 ntBASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 AC087289.5-201ENST00000586076 3175 ntBASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 MIR661-201ENST00000384842 89 ntBASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD1Q96PZ7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AC009237.14-201ENST00000609975 1594 ntBASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 RN7SL204P-201ENST00000582831 262 ntBASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 MIR6752-201ENST00000618442 71 ntBASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms