Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3BQ96NU0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3BQ96NU0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.31■□□□□ 0.36
CNTNAP3BQ96NU0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 AC002472.2-201ENST00000442739 958 ntBASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 AC093214.1-201ENST00000511688 1107 ntBASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3BQ96NU0 AC006128.1-201ENST00000624704 1661 ntBASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 AC079416.2-201ENST00000625035 1193 ntBASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3BQ96NU0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AL031432.2-201ENST00000566714 459 ntBASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AL928711.1-201ENST00000570165 459 ntBASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AL390955.2-201ENST00000603032 514 ntBASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms