Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 FAM220CP-201ENST00000395253 831 ntBASIC19.22■□□□□ 0.67
ZNF558Q96NG5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 AC027601.4-201ENST00000611259 610 ntBASIC19.22■□□□□ 0.67
ZNF558Q96NG5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF558Q96NG5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 AC098831.1-202ENST00000438821 336 ntBASIC19.21■□□□□ 0.67
ZNF558Q96NG5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF558Q96NG5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 AC005082.1-201ENST00000413042 2259 ntBASIC19.2■□□□□ 0.66
ZNF558Q96NG5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 AC012640.2-201ENST00000561606 901 ntBASIC19.2■□□□□ 0.66
ZNF558Q96NG5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 NKAPP1-205ENST00000585790 367 ntBASIC19.2■□□□□ 0.66
ZNF558Q96NG5 MTDHP4-201ENST00000600287 670 ntBASIC19.2■□□□□ 0.66
ZNF558Q96NG5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 AC008735.5-201ENST00000623544 497 ntBASIC19.2■□□□□ 0.66
ZNF558Q96NG5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF558Q96NG5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 GMCL1P1-201ENST00000463439 1581 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 MED15P5-201ENST00000423150 992 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 AC140113.2-201ENST00000604370 208 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 FAM197Y3-203ENST00000618346 717 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms