Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 BNIP3P18-201ENST00000593976 575 ntBASIC21.2■□□□□ 0.98
TRIM47Q96LD4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 AL591684.3-201ENST00000605187 298 ntBASIC21.2■□□□□ 0.98
TRIM47Q96LD4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 AL353692.3-201ENST00000407031 1396 ntBASIC21.2■□□□□ 0.98
TRIM47Q96LD4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM47Q96LD4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 MIR5100-201ENST00000579544 119 ntBASIC21.19■□□□□ 0.98
TRIM47Q96LD4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 MIR7706-201ENST00000613747 67 ntBASIC21.19■□□□□ 0.98
TRIM47Q96LD4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM47Q96LD4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 FP475955.4-201ENST00000623131 1990 ntBASIC21.18■□□□□ 0.98
TRIM47Q96LD4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AC018712.1-201ENST00000455767 687 ntBASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AC073648.2-201ENST00000510116 352 ntBASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AC011840.4-201ENST00000578471 627 ntBASIC21.18■□□□□ 0.98
TRIM47Q96LD4 MIR3180-4-201ENST00000582223 153 ntBASIC21.18■□□□□ 0.98
TRIM47Q96LD4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM47Q96LD4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 AC139887.3-201ENST00000568585 713 ntBASIC21.17■□□□□ 0.98
TRIM47Q96LD4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM47Q96LD4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 AL138781.2-201ENST00000617896 1843 ntBASIC21.16■□□□□ 0.98
TRIM47Q96LD4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM47Q96LD4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms