Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS33AQ96AX1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 AC096733.2-201ENST00000609937 1394 ntBASIC17.46■□□□□ 0.39
VPS33AQ96AX1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 AC108860.2-201ENST00000562760 2183 ntBASIC17.46■□□□□ 0.39
VPS33AQ96AX1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS33AQ96AX1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS33AQ96AX1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS33AQ96AX1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 PCDHA12-202ENST00000613593 2588 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.45■□□□□ 0.38
VPS33AQ96AX1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS33AQ96AX1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AC009053.2-201ENST00000563701 2365 ntBASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AC099398.1-201ENST00000567919 2776 ntBASIC17.44■□□□□ 0.38
VPS33AQ96AX1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AL163051.1-201ENST00000569214 1512 ntBASIC17.44■□□□□ 0.38
VPS33AQ96AX1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms