Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
SNX21Q969T3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.52■■□□□ 1.03
SNX21Q969T3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.51■■□□□ 1.03
SNX21Q969T3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.51■■□□□ 1.03
SNX21Q969T3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 FAM197Y1-201ENST00000421178 764 ntBASIC21.51■■□□□ 1.03
SNX21Q969T3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.51■■□□□ 1.03
SNX21Q969T3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 C1QBPP2-201ENST00000528754 825 ntBASIC21.51■■□□□ 1.03
SNX21Q969T3 KRT18P6-201ENST00000555540 1265 ntBASIC21.51■■□□□ 1.03
SNX21Q969T3 AC006058.3-201ENST00000606217 1069 ntBASIC21.51■■□□□ 1.03
SNX21Q969T3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.51■■□□□ 1.03
SNX21Q969T3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX21Q969T3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNX21Q969T3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.5■■□□□ 1.03
SNX21Q969T3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNX21Q969T3 AC090192.1-201ENST00000517740 490 ntBASIC21.5■■□□□ 1.03
SNX21Q969T3 AC104390.1-201ENST00000555663 520 ntBASIC21.5■■□□□ 1.03
SNX21Q969T3 AC009065.1-201ENST00000564055 1225 ntBASIC21.5■■□□□ 1.03
SNX21Q969T3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 WWOX-216ENST00000569818 525 ntBASIC21.5■■□□□ 1.03
SNX21Q969T3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SNX21Q969T3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.5■■□□□ 1.03
SNX21Q969T3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.5■■□□□ 1.03
SNX21Q969T3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SNX21Q969T3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX21Q969T3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.49■■□□□ 1.03
SNX21Q969T3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX21Q969T3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 TNRC18P3-201ENST00000441896 2691 ntBASIC21.49■■□□□ 1.03
SNX21Q969T3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX21Q969T3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 AC128676.1-201ENST00000454392 318 ntBASIC21.49■■□□□ 1.03
SNX21Q969T3 RPPH1-201ENST00000516869 333 ntBASIC21.49■■□□□ 1.03
SNX21Q969T3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX21Q969T3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX21Q969T3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX21Q969T3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNX21Q969T3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 HLA-J-201ENST00000462773 1622 ntBASIC21.48■■□□□ 1.03
SNX21Q969T3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 AC097488.1-201ENST00000507834 756 ntBASIC21.48■■□□□ 1.03
SNX21Q969T3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX21Q969T3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.48■■□□□ 1.03
SNX21Q969T3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX21Q969T3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNX21Q969T3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms