Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 PCDHB19P-201ENST00000570871 2371 ntBASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 UNC93B4-201ENST00000505679 747 ntBASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 AC083906.2-201ENST00000511578 360 ntBASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 AL445675.2-201ENST00000620291 557 ntBASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKAP2Q8WWK9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 AC034236.2-201ENST00000606662 1610 ntBASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 POM121L13P-201ENST00000422362 380 ntBASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 MIR4758-201ENST00000577688 71 ntBASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 AC131212.4-201ENST00000623606 975 ntBASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CKAP2Q8WWK9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AGGF1P2-201ENST00000426656 2106 ntBASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC106886.4-201ENST00000623557 2502 ntBASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC004980.1-204ENST00000429707 299 ntBASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC006970.2-201ENST00000450065 779 ntBASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKAP2Q8WWK9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms