Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AC016734.2-201ENST00000624325 1377 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC034236.2-201ENST00000606662 1610 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 PRELID1P1-202ENST00000567272 903 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AL121672.3-201ENST00000608644 468 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC079602.3-201ENST00000623931 403 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC112777.1-201ENST00000540175 1423 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AC135050.7-201ENST00000624508 2218 ntBASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC33Q8N5R6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 ESPNP-201ENST00000270691 2015 ntBASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 KRT18P23-201ENST00000435622 1283 ntBASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 AC112497.1-201ENST00000624824 639 ntBASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC33Q8N5R6 AC135776.1-201ENST00000319817 2481 ntBASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
CCDC33Q8N5R6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms