Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 HCG4P8-203ENST00000443049 980 ntBASIC18.83■□□□□ 0.6
SCML4Q8N228 TOB2P1-201ENST00000469761 992 ntBASIC18.83■□□□□ 0.6
SCML4Q8N228 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.83■□□□□ 0.6
SCML4Q8N228 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.83■□□□□ 0.6
SCML4Q8N228 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.83■□□□□ 0.6
SCML4Q8N228 AC012615.1-201ENST00000565797 1299 ntBASIC18.83■□□□□ 0.6
SCML4Q8N228 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.83■□□□□ 0.6
SCML4Q8N228 Z69720.1-201ENST00000601483 472 ntBASIC18.83■□□□□ 0.6
SCML4Q8N228 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCML4Q8N228 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SCML4Q8N228 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.83■□□□□ 0.6
SCML4Q8N228 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCML4Q8N228 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCML4Q8N228 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.82■□□□□ 0.6
SCML4Q8N228 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 IGHV3-47-201ENST00000425060 335 ntBASIC18.82■□□□□ 0.6
SCML4Q8N228 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.82■□□□□ 0.6
SCML4Q8N228 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
SCML4Q8N228 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SCML4Q8N228 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCML4Q8N228 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
SCML4Q8N228 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCML4Q8N228 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
SCML4Q8N228 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 AC097374.2-201ENST00000618617 1306 ntBASIC18.81■□□□□ 0.6
SCML4Q8N228 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCML4Q8N228 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SCML4Q8N228 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 LINC00265-3P-201ENST00000447588 903 ntBASIC18.81■□□□□ 0.6
SCML4Q8N228 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SCML4Q8N228 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.81■□□□□ 0.6
SCML4Q8N228 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.81■□□□□ 0.6
SCML4Q8N228 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
SCML4Q8N228 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 AP005901.3-202ENST00000581653 237 ntBASIC18.81■□□□□ 0.6
SCML4Q8N228 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.81■□□□□ 0.6
SCML4Q8N228 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
SCML4Q8N228 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCML4Q8N228 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCML4Q8N228 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML4Q8N228 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SCML4Q8N228 REXO1L9P-201ENST00000604264 2108 ntBASIC18.8■□□□□ 0.6
SCML4Q8N228 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML4Q8N228 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.8■□□□□ 0.6
SCML4Q8N228 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML4Q8N228 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML4Q8N228 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms