Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 AC008687.5-201ENST00000593746 558 ntBASIC22.46■■□□□ 1.19
SMC5Q8IY18 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 AL023973.1-201ENST00000624619 620 ntBASIC22.46■■□□□ 1.19
SMC5Q8IY18 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 PP12613-201ENST00000424958 2230 ntBASIC22.46■■□□□ 1.19
SMC5Q8IY18 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SMC5Q8IY18 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.46■■□□□ 1.19
SMC5Q8IY18 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
SMC5Q8IY18 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SMC5Q8IY18 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SMC5Q8IY18 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 AC020763.4-201ENST00000623414 4170 ntBASIC22.45■■□□□ 1.18
SMC5Q8IY18 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMC5Q8IY18 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.45■■□□□ 1.18
SMC5Q8IY18 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.44■■□□□ 1.18
SMC5Q8IY18 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 AL441883.1-201ENST00000566170 1045 ntBASIC22.44■■□□□ 1.18
SMC5Q8IY18 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 KRT89P-201ENST00000620027 1478 ntBASIC22.44■■□□□ 1.18
SMC5Q8IY18 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 LINC00602-201ENST00000629776 2065 ntBASIC22.44■■□□□ 1.18
SMC5Q8IY18 AC097493.4-201ENST00000641197 219 ntBASIC22.44■■□□□ 1.18
SMC5Q8IY18 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMC5Q8IY18 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.44■■□□□ 1.18
SMC5Q8IY18 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 RASA4DP-201ENST00000460726 1199 ntBASIC22.43■■□□□ 1.18
SMC5Q8IY18 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 AL645608.8-201ENST00000606034 2086 ntBASIC22.43■■□□□ 1.18
SMC5Q8IY18 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC22.43■■□□□ 1.18
SMC5Q8IY18 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMC5Q8IY18 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 AC073508.3-201ENST00000619697 1419 ntBASIC22.42■■□□□ 1.18
SMC5Q8IY18 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms