Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 AC024243.1-201ENST00000609234 778 ntBASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 FAM87A-204ENST00000613235 858 ntBASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00346Q8IVM7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LINC00346Q8IVM7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00346Q8IVM7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LINC00346Q8IVM7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC009065.1-201ENST00000564055 1225 ntBASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC010240.3-201ENST00000607688 395 ntBASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00346Q8IVM7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms