Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRLF3Q8IUI8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRLF3Q8IUI8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRLF3Q8IUI8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 NIFKP9-201ENST00000419265 221 ntBASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRLF3Q8IUI8 AL096828.2-201ENST00000567259 1965 ntBASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 RCC2P3-201ENST00000418112 1537 ntBASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 CR392000.1-201ENST00000624770 1228 ntBASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRLF3Q8IUI8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.14■□□□□ 0.5
CRLF3Q8IUI8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CRLF3Q8IUI8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 AC211429.1-201ENST00000415277 523 ntBASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 KSR1P1-201ENST00000446298 240 ntBASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.14■□□□□ 0.49
CRLF3Q8IUI8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms