Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 AC091812.2-201ENST00000619081 385 ntBASIC15.23■□□□□ 0.03
CSMD2Q7Z408 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 SIGLEC30P-201ENST00000455569 941 ntBASIC15.23■□□□□ 0.03
CSMD2Q7Z408 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD2Q7Z408 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 OR7E47P-204ENST00000575924 449 ntBASIC15.22■□□□□ 0.03
CSMD2Q7Z408 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AC079776.2-201ENST00000641154 1609 ntBASIC15.22■□□□□ 0.03
CSMD2Q7Z408 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 RN7SL204P-201ENST00000582831 262 ntBASIC15.22■□□□□ 0.03
CSMD2Q7Z408 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.22■□□□□ 0.03
CSMD2Q7Z408 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 HCG4B-203ENST00000450128 991 ntBASIC15.21■□□□□ 0.03
CSMD2Q7Z408 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 AC108073.2-201ENST00000464002 357 ntBASIC15.21■□□□□ 0.03
CSMD2Q7Z408 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD2Q7Z408 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD2Q7Z408 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD2Q7Z408 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.21■□□□□ 0.02
CSMD2Q7Z408 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.21■□□□□ 0.02
CSMD2Q7Z408 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD2Q7Z408 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC015911.4-201ENST00000588022 1070 ntBASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC005593.1-201ENST00000624894 515 ntBASIC15.2■□□□□ 0.02
CSMD2Q7Z408 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms