Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC087499.1-201ENST00000418141 1075 ntBASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 CA15P1-201ENST00000481698 905 ntBASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF111Q6ZNA4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF111Q6ZNA4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF111Q6ZNA4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 AC046158.3-201ENST00000624947 2558 ntBASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 SLC25A1P2-201ENST00000430693 912 ntBASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 CCR12P-201ENST00000446203 998 ntBASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 AP001094.4-201ENST00000579008 2176 ntBASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.63■□□□□ 0.41
RNF111Q6ZNA4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms