Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 NUS1P2-201ENST00000417358 873 ntBASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SWSAP1Q6NVH7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 EMBP1-201ENST00000458200 901 ntBASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 BNIP3P18-201ENST00000593976 575 ntBASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 LINC01711-201ENST00000598340 967 ntBASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SWSAP1Q6NVH7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
SWSAP1Q6NVH7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 POM121L3P-201ENST00000419331 1163 ntBASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 KRT16P4-201ENST00000453883 522 ntBASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AC112698.1-201ENST00000510299 916 ntBASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.14■□□□□ 0.81
SWSAP1Q6NVH7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SWSAP1Q6NVH7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SWSAP1Q6NVH7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SWSAP1Q6NVH7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms