Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
ALFQ53S48 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ALFQ53S48 AP002383.4-201ENST00000442518 975 ntBASIC18.65■□□□□ 0.58
ALFQ53S48 TSSC2-201ENST00000450217 709 ntBASIC18.65■□□□□ 0.58
ALFQ53S48 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.65■□□□□ 0.58
ALFQ53S48 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ALFQ53S48 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.65■□□□□ 0.58
ALFQ53S48 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.65■□□□□ 0.58
ALFQ53S48 AC132938.6-201ENST00000623828 1655 ntBASIC18.65■□□□□ 0.58
ALFQ53S48 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.65■□□□□ 0.58
ALFQ53S48 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.65■□□□□ 0.58
ALFQ53S48 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALFQ53S48 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.64■□□□□ 0.58
ALFQ53S48 AL096828.2-201ENST00000567259 1965 ntBASIC18.64■□□□□ 0.58
ALFQ53S48 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.64■□□□□ 0.57
ALFQ53S48 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 NPAP1P7-201ENST00000613027 823 ntBASIC18.64■□□□□ 0.57
ALFQ53S48 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.64■□□□□ 0.57
ALFQ53S48 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ALFQ53S48 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
ALFQ53S48 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALFQ53S48 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ALFQ53S48 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ALFQ53S48 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.63■□□□□ 0.57
ALFQ53S48 CHCHD2P8-201ENST00000429873 447 ntBASIC18.63■□□□□ 0.57
ALFQ53S48 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.63■□□□□ 0.57
ALFQ53S48 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.63■□□□□ 0.57
ALFQ53S48 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.63■□□□□ 0.57
ALFQ53S48 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 AC093010.1-201ENST00000473625 1624 ntBASIC18.63■□□□□ 0.57
ALFQ53S48 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALFQ53S48 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
ALFQ53S48 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.63■□□□□ 0.57
ALFQ53S48 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
ALFQ53S48 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
ALFQ53S48 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
ALFQ53S48 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
ALFQ53S48 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 NEFHP1-201ENST00000412845 2629 ntBASIC18.62■□□□□ 0.57
ALFQ53S48 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
ALFQ53S48 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.62■□□□□ 0.57
ALFQ53S48 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.62■□□□□ 0.57
ALFQ53S48 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms