Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 ELK2BP-201ENST00000415014 1224 ntBASIC20.69■□□□□ 0.9
SREBF2Q12772 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SREBF2Q12772 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 ACTG1P14-201ENST00000446382 1122 ntBASIC20.69■□□□□ 0.9
SREBF2Q12772 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.69■□□□□ 0.9
SREBF2Q12772 AL031432.2-201ENST00000566714 459 ntBASIC20.69■□□□□ 0.9
SREBF2Q12772 AL928711.1-201ENST00000570165 459 ntBASIC20.69■□□□□ 0.9
SREBF2Q12772 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.69■□□□□ 0.9
SREBF2Q12772 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.69■□□□□ 0.9
SREBF2Q12772 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.69■□□□□ 0.9
SREBF2Q12772 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SREBF2Q12772 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 KRT8P47-201ENST00000604727 1398 ntBASIC20.69■□□□□ 0.9
SREBF2Q12772 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SREBF2Q12772 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SREBF2Q12772 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
SREBF2Q12772 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SREBF2Q12772 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.68■□□□□ 0.9
SREBF2Q12772 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.68■□□□□ 0.9
SREBF2Q12772 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
SREBF2Q12772 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.68■□□□□ 0.9
SREBF2Q12772 PAWRP1-201ENST00000451083 565 ntBASIC20.68■□□□□ 0.9
SREBF2Q12772 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.68■□□□□ 0.9
SREBF2Q12772 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.68■□□□□ 0.9
SREBF2Q12772 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.68■□□□□ 0.9
SREBF2Q12772 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.68■□□□□ 0.9
SREBF2Q12772 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
SREBF2Q12772 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SREBF2Q12772 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.68■□□□□ 0.9
SREBF2Q12772 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
SREBF2Q12772 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.67■□□□□ 0.9
SREBF2Q12772 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.67■□□□□ 0.9
SREBF2Q12772 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.67■□□□□ 0.9
SREBF2Q12772 IGHV3-65-201ENST00000523210 341 ntBASIC20.67■□□□□ 0.9
SREBF2Q12772 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SREBF2Q12772 PDPK2P-202ENST00000562415 1191 ntBASIC20.67■□□□□ 0.9
SREBF2Q12772 AC004449.1-201ENST00000564240 433 ntBASIC20.67■□□□□ 0.9
SREBF2Q12772 AC008667.4-201ENST00000607370 168 ntBASIC20.67■□□□□ 0.9
SREBF2Q12772 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SREBF2Q12772 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.67■□□□□ 0.9
SREBF2Q12772 LINC01126-201ENST00000623515 1646 ntBASIC20.67■□□□□ 0.9
SREBF2Q12772 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SREBF2Q12772 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SREBF2Q12772 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.66■□□□□ 0.9
SREBF2Q12772 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.66■□□□□ 0.9
SREBF2Q12772 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SREBF2Q12772 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.66■□□□□ 0.9
SREBF2Q12772 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.66■□□□□ 0.9
SREBF2Q12772 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.66■□□□□ 0.9
SREBF2Q12772 AC093512.1-201ENST00000617969 520 ntBASIC20.66■□□□□ 0.9
SREBF2Q12772 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.66■□□□□ 0.9
SREBF2Q12772 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SREBF2Q12772 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.66■□□□□ 0.9
SREBF2Q12772 AC006504.4-201ENST00000592118 1568 ntBASIC20.66■□□□□ 0.9
SREBF2Q12772 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SREBF2Q12772 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms