Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 AP001412.1-201ENST00000608405 714 ntBASIC13.93□□□□□ -0.18
HIST1H1AQ02539 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 AC046158.3-201ENST00000624947 2558 ntBASIC13.93□□□□□ -0.18
HIST1H1AQ02539 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 MFAP1P1-201ENST00000442257 1255 ntBASIC13.92□□□□□ -0.18
HIST1H1AQ02539 UBE2SP1-201ENST00000450587 669 ntBASIC13.92□□□□□ -0.18
HIST1H1AQ02539 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1AQ02539 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AC008764.6-201ENST00000595909 2069 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 MESTP1-201ENST00000404287 994 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AL355355.2-201ENST00000442321 338 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AC098590.1-201ENST00000468126 897 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 NUDT16P1-203ENST00000513809 620 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 DGCR10-201ENST00000609839 495 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 AL391005.1-201ENST00000623953 2435 ntBASIC13.91□□□□□ -0.18
HIST1H1AQ02539 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H1AQ02539 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms