Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 BICD1-207ENST00000551848 1962 ntBASIC19.98■□□□□ 0.79
PEX3P56589 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PEX3P56589 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.98■□□□□ 0.79
PEX3P56589 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.98■□□□□ 0.79
PEX3P56589 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.98■□□□□ 0.79
PEX3P56589 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.98■□□□□ 0.79
PEX3P56589 NEFHP1-201ENST00000412845 2629 ntBASIC19.98■□□□□ 0.79
PEX3P56589 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PEX3P56589 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 REXO1L9P-201ENST00000604264 2108 ntBASIC19.97■□□□□ 0.79
PEX3P56589 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.97■□□□□ 0.79
PEX3P56589 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PEX3P56589 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 CHCHD2P8-201ENST00000429873 447 ntBASIC19.97■□□□□ 0.79
PEX3P56589 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.97■□□□□ 0.79
PEX3P56589 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.97■□□□□ 0.79
PEX3P56589 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.97■□□□□ 0.79
PEX3P56589 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.97■□□□□ 0.79
PEX3P56589 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PEX3P56589 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PEX3P56589 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PEX3P56589 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 TSPY12P-201ENST00000421279 868 ntBASIC19.96■□□□□ 0.79
PEX3P56589 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.96■□□□□ 0.79
PEX3P56589 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.96■□□□□ 0.79
PEX3P56589 AP002383.4-201ENST00000442518 975 ntBASIC19.96■□□□□ 0.79
PEX3P56589 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
PEX3P56589 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.96■□□□□ 0.79
PEX3P56589 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.96■□□□□ 0.79
PEX3P56589 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.96■□□□□ 0.79
PEX3P56589 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.96■□□□□ 0.79
PEX3P56589 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.96■□□□□ 0.79
PEX3P56589 IGHV3-41-201ENST00000613121 348 ntBASIC19.96■□□□□ 0.79
PEX3P56589 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PEX3P56589 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.96■□□□□ 0.79
PEX3P56589 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PEX3P56589 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PEX3P56589 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.95■□□□□ 0.78
PEX3P56589 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 AC090616.6-201ENST00000582640 721 ntBASIC19.95■□□□□ 0.78
PEX3P56589 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.95■□□□□ 0.78
PEX3P56589 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 AC124864.1-201ENST00000623408 392 ntBASIC19.95■□□□□ 0.78
PEX3P56589 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms