Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH13P55290 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH13P55290 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH13P55290 SNORA78-201ENST00000459373 127 ntBASIC17.78■□□□□ 0.44
CDH13P55290 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 AC116562.4-202ENST00000641738 218 ntBASIC17.78■□□□□ 0.44
CDH13P55290 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH13P55290 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH13P55290 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CDH13P55290 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH13P55290 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 INGX-201ENST00000359239 846 ntBASIC17.77■□□□□ 0.44
CDH13P55290 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH13P55290 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CDH13P55290 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH13P55290 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH13P55290 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH13P55290 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH13P55290 AL355075.4-201ENST00000554988 638 ntBASIC17.77■□□□□ 0.44
CDH13P55290 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH13P55290 AC112497.1-201ENST00000624824 639 ntBASIC17.77■□□□□ 0.44
CDH13P55290 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH13P55290 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDH13P55290 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDH13P55290 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDH13P55290 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH13P55290 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDH13P55290 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH13P55290 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CDH13P55290 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH13P55290 AC093010.1-201ENST00000473625 1624 ntBASIC17.76■□□□□ 0.43
CDH13P55290 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDH13P55290 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 AC106820.2-201ENST00000563775 3264 ntBASIC17.76■□□□□ 0.43
CDH13P55290 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH13P55290 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH13P55290 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH13P55290 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH13P55290 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.76■□□□□ 0.43
CDH13P55290 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH13P55290 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH13P55290 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH13P55290 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH13P55290 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms