Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.62■□□□□ 0.41
PDX1P52945 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 TP73-AS1-207ENST00000624167 988 ntBASIC17.62■□□□□ 0.41
PDX1P52945 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.62■□□□□ 0.41
PDX1P52945 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PDX1P52945 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDX1P52945 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.62■□□□□ 0.41
PDX1P52945 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 AL031598.1-201ENST00000561511 1773 ntBASIC17.61■□□□□ 0.41
PDX1P52945 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 AF238378.1-201ENST00000526806 358 ntBASIC17.61■□□□□ 0.41
PDX1P52945 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.61■□□□□ 0.41
PDX1P52945 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.61■□□□□ 0.41
PDX1P52945 AL671883.3-201ENST00000603274 991 ntBASIC17.61■□□□□ 0.41
PDX1P52945 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDX1P52945 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDX1P52945 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
PDX1P52945 AL357033.4-201ENST00000617703 1807 ntBASIC17.61■□□□□ 0.41
PDX1P52945 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PDX1P52945 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.6■□□□□ 0.41
PDX1P52945 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.6■□□□□ 0.41
PDX1P52945 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 MTMR9LP-203ENST00000426597 1545 ntBASIC17.6■□□□□ 0.41
PDX1P52945 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.6■□□□□ 0.41
PDX1P52945 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 HEIH-201ENST00000623091 1652 ntBASIC17.6■□□□□ 0.41
PDX1P52945 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.6■□□□□ 0.41
PDX1P52945 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDX1P52945 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDX1P52945 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDX1P52945 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDX1P52945 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.59■□□□□ 0.41
PDX1P52945 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDX1P52945 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms