Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
NCAPD3P42695 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
NCAPD3P42695 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC31.87■■■□□ 2.69
NCAPD3P42695 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC31.87■■■□□ 2.69
NCAPD3P42695 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC31.87■■■□□ 2.69
NCAPD3P42695 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC31.86■■■□□ 2.69
NCAPD3P42695 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NCAPD3P42695 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NCAPD3P42695 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NCAPD3P42695 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC31.86■■■□□ 2.69
NCAPD3P42695 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NCAPD3P42695 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
NCAPD3P42695 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NCAPD3P42695 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC31.86■■■□□ 2.69
NCAPD3P42695 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
NCAPD3P42695 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NCAPD3P42695 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NCAPD3P42695 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC31.85■■■□□ 2.69
NCAPD3P42695 AC022145.2-201ENST00000598203 171 ntBASIC31.85■■■□□ 2.69
NCAPD3P42695 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
NCAPD3P42695 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
NCAPD3P42695 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NCAPD3P42695 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.85■■■□□ 2.69
NCAPD3P42695 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NCAPD3P42695 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
NCAPD3P42695 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.85■■■□□ 2.69
NCAPD3P42695 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC31.85■■■□□ 2.69
NCAPD3P42695 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
NCAPD3P42695 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
NCAPD3P42695 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.85■■■□□ 2.69
NCAPD3P42695 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC31.84■■■□□ 2.69
NCAPD3P42695 CD63-210ENST00000550776 870 ntTSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 SNAI3-AS1-205ENST00000568633 2096 ntBASIC31.84■■■□□ 2.69
NCAPD3P42695 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC31.84■■■□□ 2.69
NCAPD3P42695 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 AL020989.1-201ENST00000422979 469 ntBASIC31.84■■■□□ 2.69
NCAPD3P42695 AC023141.5-201ENST00000458585 616 ntBASIC31.84■■■□□ 2.69
NCAPD3P42695 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC31.84■■■□□ 2.69
NCAPD3P42695 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC31.84■■■□□ 2.69
NCAPD3P42695 AQP6-203ENST00000551733 849 ntTSL 3 BASIC31.84■■■□□ 2.69
NCAPD3P42695 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.84■■■□□ 2.69
NCAPD3P42695 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NCAPD3P42695 TBC1D3P5-201ENST00000579401 1545 ntBASIC31.84■■■□□ 2.69
NCAPD3P42695 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
NCAPD3P42695 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC31.83■■■□□ 2.69
NCAPD3P42695 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NCAPD3P42695 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC31.83■■■□□ 2.69
NCAPD3P42695 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
NCAPD3P42695 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC31.83■■■□□ 2.69
NCAPD3P42695 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC31.83■■■□□ 2.69
NCAPD3P42695 AC132938.6-201ENST00000623828 1655 ntBASIC31.83■■■□□ 2.69
NCAPD3P42695 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NCAPD3P42695 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.83■■■□□ 2.69
NCAPD3P42695 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC31.83■■■□□ 2.69
NCAPD3P42695 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC31.82■■■□□ 2.68
NCAPD3P42695 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NCAPD3P42695 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NCAPD3P42695 SNCG-201ENST00000348795 684 ntTSL 2 BASIC31.82■■■□□ 2.68
NCAPD3P42695 MRPL20P1-201ENST00000400819 433 ntBASIC31.82■■■□□ 2.68
NCAPD3P42695 AC015922.1-201ENST00000421102 1152 ntBASIC31.82■■■□□ 2.68
NCAPD3P42695 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.82■■■□□ 2.68
NCAPD3P42695 SMN2-210ENST00000511812 867 ntTSL 2 BASIC31.82■■■□□ 2.68
NCAPD3P42695 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC31.82■■■□□ 2.68
NCAPD3P42695 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC31.82■■■□□ 2.68
NCAPD3P42695 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC31.82■■■□□ 2.68
NCAPD3P42695 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
NCAPD3P42695 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NCAPD3P42695 METTL26-204ENST00000397665 558 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NCAPD3P42695 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC31.81■■■□□ 2.68
NCAPD3P42695 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC31.81■■■□□ 2.68
NCAPD3P42695 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NCAPD3P42695 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
NCAPD3P42695 BCAR1-209ENST00000546196 1340 ntBASIC31.81■■■□□ 2.68
NCAPD3P42695 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms