Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC3P40938 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.61■□□□□ 0.25
RFC3P40938 AC104819.1-201ENST00000504587 486 ntBASIC16.61■□□□□ 0.25
RFC3P40938 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
RFC3P40938 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.61■□□□□ 0.25
RFC3P40938 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.61■□□□□ 0.25
RFC3P40938 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 SDHAP2-201ENST00000455183 2001 ntBASIC16.61■□□□□ 0.25
RFC3P40938 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
RFC3P40938 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 AC233702.3-201ENST00000578656 1387 ntBASIC16.61■□□□□ 0.25
RFC3P40938 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.61■□□□□ 0.25
RFC3P40938 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC3P40938 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC3P40938 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.6■□□□□ 0.25
RFC3P40938 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.6■□□□□ 0.25
RFC3P40938 AC091607.1-201ENST00000490318 1060 ntBASIC16.6■□□□□ 0.25
RFC3P40938 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.6■□□□□ 0.25
RFC3P40938 AC012615.1-201ENST00000565797 1299 ntBASIC16.6■□□□□ 0.25
RFC3P40938 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 AC111152.3-201ENST00000569699 673 ntBASIC16.6■□□□□ 0.25
RFC3P40938 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.6■□□□□ 0.25
RFC3P40938 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RFC3P40938 IFNL4P1-201ENST00000607083 540 ntBASIC16.6■□□□□ 0.25
RFC3P40938 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.6■□□□□ 0.25
RFC3P40938 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.6■□□□□ 0.25
RFC3P40938 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC3P40938 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 ANO7L1-203ENST00000602586 1720 ntBASIC16.59■□□□□ 0.25
RFC3P40938 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFC3P40938 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC3P40938 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC3P40938 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC3P40938 AC099336.1-202ENST00000602961 463 ntBASIC16.59■□□□□ 0.25
RFC3P40938 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.59■□□□□ 0.25
RFC3P40938 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 FZD10-202ENST00000539839 3282 ntBASIC16.59■□□□□ 0.25
RFC3P40938 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms