Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX6P35712 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 AL355472.2-201ENST00000422958 438 ntBASIC16.3■□□□□ 0.2
SOX6P35712 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 AC133552.2-202ENST00000575694 574 ntBASIC16.3■□□□□ 0.2
SOX6P35712 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SOX6P35712 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SOX6P35712 AL096828.2-201ENST00000567259 1965 ntBASIC16.29■□□□□ 0.2
SOX6P35712 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.29■□□□□ 0.2
SOX6P35712 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
SOX6P35712 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX6P35712 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SOX6P35712 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SOX6P35712 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SOX6P35712 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX6P35712 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX6P35712 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.29■□□□□ 0.2
SOX6P35712 AF201337.1-201ENST00000520239 748 ntBASIC16.29■□□□□ 0.2
SOX6P35712 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX6P35712 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX6P35712 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX6P35712 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SOX6P35712 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX6P35712 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX6P35712 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SOX6P35712 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 TSPY23P-201ENST00000440136 739 ntBASIC16.28■□□□□ 0.2
SOX6P35712 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.28■□□□□ 0.2
SOX6P35712 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX6P35712 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX6P35712 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.28■□□□□ 0.2
SOX6P35712 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SOX6P35712 FLJ16779-201ENST00000612722 7638 ntBASIC16.27■□□□□ 0.2
SOX6P35712 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX6P35712 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms