Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RXRBP28702 AC009102.3-201ENST00000623118 1491 ntBASIC23.63■■□□□ 1.37
RXRBP28702 LINC01126-201ENST00000623515 1646 ntBASIC23.63■■□□□ 1.37
RXRBP28702 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.63■■□□□ 1.37
RXRBP28702 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 AC107890.1-201ENST00000422478 521 ntBASIC23.63■■□□□ 1.37
RXRBP28702 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RXRBP28702 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 PARP8-218ENST00000513738 596 ntTSL 4 BASIC23.63■■□□□ 1.37
RXRBP28702 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.63■■□□□ 1.37
RXRBP28702 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.63■■□□□ 1.37
RXRBP28702 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
RXRBP28702 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RXRBP28702 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
RXRBP28702 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RXRBP28702 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RXRBP28702 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.63■■□□□ 1.37
RXRBP28702 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RXRBP28702 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RXRBP28702 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
RXRBP28702 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.62■■□□□ 1.37
RXRBP28702 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.62■■□□□ 1.37
RXRBP28702 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.62■■□□□ 1.37
RXRBP28702 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RXRBP28702 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC23.62■■□□□ 1.37
RXRBP28702 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.62■■□□□ 1.37
RXRBP28702 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.62■■□□□ 1.37
RXRBP28702 KRT17P7-201ENST00000451704 1104 ntBASIC23.62■■□□□ 1.37
RXRBP28702 TIMM8BP1-201ENST00000452384 211 ntBASIC23.62■■□□□ 1.37
RXRBP28702 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.62■■□□□ 1.37
RXRBP28702 AL512356.2-201ENST00000546955 174 ntBASIC23.62■■□□□ 1.37
RXRBP28702 IFT20-216ENST00000588477 774 ntTSL 5 BASIC23.62■■□□□ 1.37
RXRBP28702 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.62■■□□□ 1.37
RXRBP28702 FO538757.1-201ENST00000623083 1397 ntBASIC23.62■■□□□ 1.37
RXRBP28702 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RXRBP28702 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
RXRBP28702 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RXRBP28702 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 NCF1C-201ENST00000438382 1427 ntBASIC23.61■■□□□ 1.37
RXRBP28702 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RXRBP28702 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RXRBP28702 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.61■■□□□ 1.37
RXRBP28702 AL512638.1-201ENST00000457493 794 ntBASIC23.61■■□□□ 1.37
RXRBP28702 NOP2-211ENST00000540228 668 ntTSL 2 BASIC23.61■■□□□ 1.37
RXRBP28702 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 AL390754.1-201ENST00000619088 582 ntBASIC23.61■■□□□ 1.37
RXRBP28702 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.61■■□□□ 1.37
RXRBP28702 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.61■■□□□ 1.37
RXRBP28702 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RXRBP28702 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.61■■□□□ 1.37
RXRBP28702 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RXRBP28702 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
RXRBP28702 AL024508.2-201ENST00000607749 1894 ntBASIC23.6■■□□□ 1.37
RXRBP28702 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC23.6■■□□□ 1.37
RXRBP28702 AC005237.2-201ENST00000434368 219 ntBASIC23.6■■□□□ 1.37
RXRBP28702 U91328.1-201ENST00000437528 223 ntBASIC23.6■■□□□ 1.37
RXRBP28702 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC23.6■■□□□ 1.37
RXRBP28702 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.6■■□□□ 1.37
RXRBP28702 GPR53P-205ENST00000457298 1084 ntBASIC23.6■■□□□ 1.37
RXRBP28702 AC069335.1-201ENST00000489972 472 ntBASIC23.6■■□□□ 1.37
RXRBP28702 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC23.6■■□□□ 1.37
RXRBP28702 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.6■■□□□ 1.37
RXRBP28702 OR7E47P-204ENST00000575924 449 ntBASIC23.6■■□□□ 1.37
RXRBP28702 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC23.6■■□□□ 1.37
RXRBP28702 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RXRBP28702 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.6■■□□□ 1.37
RXRBP28702 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RXRBP28702 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RXRBP28702 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.59■■□□□ 1.37
RXRBP28702 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RXRBP28702 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.59■■□□□ 1.37
RXRBP28702 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms