Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL024508.2-201ENST00000607749 1894 ntBASIC16.07■□□□□ 0.16
MSR1P21757 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.07■□□□□ 0.16
MSR1P21757 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MSR1P21757 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MSR1P21757 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.07■□□□□ 0.16
MSR1P21757 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.07■□□□□ 0.16
MSR1P21757 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MSR1P21757 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MSR1P21757 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MSR1P21757 AC018470.1-201ENST00000624790 3129 ntBASIC16.06■□□□□ 0.16
MSR1P21757 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 LINC01126-201ENST00000623515 1646 ntBASIC16.06■□□□□ 0.16
MSR1P21757 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MSR1P21757 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.06■□□□□ 0.16
MSR1P21757 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MSR1P21757 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.06■□□□□ 0.16
MSR1P21757 AL137013.1-201ENST00000432946 1228 ntBASIC16.06■□□□□ 0.16
MSR1P21757 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.06■□□□□ 0.16
MSR1P21757 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.06■□□□□ 0.16
MSR1P21757 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.06■□□□□ 0.16
MSR1P21757 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 AC008687.5-201ENST00000593746 558 ntBASIC16.06■□□□□ 0.16
MSR1P21757 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MSR1P21757 AL023973.1-201ENST00000624619 620 ntBASIC16.06■□□□□ 0.16
MSR1P21757 AL157888.1-201ENST00000631930 593 ntBASIC16.06■□□□□ 0.16
MSR1P21757 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.06■□□□□ 0.16
MSR1P21757 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MSR1P21757 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 FLJ13224-201ENST00000313737 1514 ntBASIC16.05■□□□□ 0.16
MSR1P21757 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.05■□□□□ 0.16
MSR1P21757 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 COX11P1-201ENST00000489116 835 ntBASIC16.05■□□□□ 0.16
MSR1P21757 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 GCSHP2-201ENST00000560971 527 ntBASIC16.05■□□□□ 0.16
MSR1P21757 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.05■□□□□ 0.16
MSR1P21757 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MSR1P21757 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MSR1P21757 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MSR1P21757 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MSR1P21757 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MSR1P21757 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.04■□□□□ 0.16
MSR1P21757 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.04■□□□□ 0.16
MSR1P21757 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MSR1P21757 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 TERF1P1-201ENST00000311003 1181 ntBASIC16.04■□□□□ 0.16
MSR1P21757 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MSR1P21757 PVRIG2P-201ENST00000435460 978 ntBASIC16.04■□□□□ 0.16
MSR1P21757 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.04■□□□□ 0.16
MSR1P21757 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.04■□□□□ 0.16
MSR1P21757 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms