Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CTSBP07858 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.17■□□□□ 0.34
CTSBP07858 AC008687.5-201ENST00000593746 558 ntBASIC17.17■□□□□ 0.34
CTSBP07858 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.17■□□□□ 0.34
CTSBP07858 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.17■□□□□ 0.34
CTSBP07858 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.17■□□□□ 0.34
CTSBP07858 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSBP07858 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTSBP07858 AC090164.3-201ENST00000610780 2143 ntBASIC17.17■□□□□ 0.34
CTSBP07858 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.17■□□□□ 0.34
CTSBP07858 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSBP07858 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSBP07858 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
CTSBP07858 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTSBP07858 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTSBP07858 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 AIRN-201ENST00000601203 4374 ntBASIC17.16■□□□□ 0.34
CTSBP07858 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.16■□□□□ 0.34
CTSBP07858 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CTSBP07858 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTSBP07858 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CTSBP07858 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.16■□□□□ 0.34
CTSBP07858 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSBP07858 KRT18P31-201ENST00000506277 1292 ntBASIC17.16■□□□□ 0.34
CTSBP07858 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.16■□□□□ 0.34
CTSBP07858 RN7SL510P-201ENST00000581311 263 ntBASIC17.16■□□□□ 0.34
CTSBP07858 BNIP3P18-201ENST00000593976 575 ntBASIC17.16■□□□□ 0.34
CTSBP07858 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.16■□□□□ 0.34
CTSBP07858 IFNL4P1-201ENST00000607083 540 ntBASIC17.16■□□□□ 0.34
CTSBP07858 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CTSBP07858 AC093010.1-201ENST00000473625 1624 ntBASIC17.16■□□□□ 0.34
CTSBP07858 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.16■□□□□ 0.34
CTSBP07858 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSBP07858 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSBP07858 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSBP07858 EMBP1-201ENST00000458200 901 ntBASIC17.15■□□□□ 0.34
CTSBP07858 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 AL691432.3-201ENST00000621860 400 ntBASIC17.15■□□□□ 0.34
CTSBP07858 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSBP07858 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSBP07858 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSBP07858 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSBP07858 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSBP07858 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.15■□□□□ 0.34
CTSBP07858 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSBP07858 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTSBP07858 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CTSBP07858 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CTSBP07858 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CTSBP07858 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSBP07858 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTSBP07858 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.14■□□□□ 0.33
CTSBP07858 NUS1P2-201ENST00000417358 873 ntBASIC17.14■□□□□ 0.33
CTSBP07858 AC246785.2-201ENST00000432512 513 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms