Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.15■□□□□ 0.66
RB1P06400 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RB1P06400 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.15■□□□□ 0.66
RB1P06400 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RB1P06400 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
RB1P06400 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.15■□□□□ 0.66
RB1P06400 AC079776.2-201ENST00000641154 1609 ntBASIC19.14■□□□□ 0.66
RB1P06400 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RB1P06400 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.14■□□□□ 0.65
RB1P06400 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RB1P06400 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.14■□□□□ 0.65
RB1P06400 AC211486.1-202ENST00000416371 468 ntBASIC19.14■□□□□ 0.65
RB1P06400 PRYP5-201ENST00000451909 266 ntBASIC19.14■□□□□ 0.65
RB1P06400 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.14■□□□□ 0.65
RB1P06400 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.14■□□□□ 0.65
RB1P06400 AC211476.1-201ENST00000503899 468 ntBASIC19.14■□□□□ 0.65
RB1P06400 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.14■□□□□ 0.65
RB1P06400 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 AC005593.1-201ENST00000624894 515 ntBASIC19.14■□□□□ 0.65
RB1P06400 PCDHAC2-203ENST00000615316 3011 ntBASIC19.14■□□□□ 0.65
RB1P06400 AC022898.2-201ENST00000616822 1312 ntBASIC19.14■□□□□ 0.65
RB1P06400 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.14■□□□□ 0.65
RB1P06400 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.14■□□□□ 0.65
RB1P06400 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RB1P06400 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.65
RB1P06400 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RB1P06400 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.13■□□□□ 0.65
RB1P06400 KRT18P27-201ENST00000427733 1299 ntBASIC19.13■□□□□ 0.65
RB1P06400 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 AP006288.1-201ENST00000446065 395 ntBASIC19.13■□□□□ 0.65
RB1P06400 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.13■□□□□ 0.65
RB1P06400 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.13■□□□□ 0.65
RB1P06400 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.13■□□□□ 0.65
RB1P06400 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.13■□□□□ 0.65
RB1P06400 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
RB1P06400 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RB1P06400 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RB1P06400 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
RB1P06400 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RB1P06400 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.12■□□□□ 0.65
RB1P06400 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.12■□□□□ 0.65
RB1P06400 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.12■□□□□ 0.65
RB1P06400 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.12■□□□□ 0.65
RB1P06400 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RB1P06400 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RB1P06400 AC023274.1-201ENST00000418278 595 ntBASIC19.12■□□□□ 0.65
RB1P06400 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.12■□□□□ 0.65
RB1P06400 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.12■□□□□ 0.65
RB1P06400 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.12■□□□□ 0.65
RB1P06400 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RB1P06400 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
RB1P06400 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms