Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 MIR661-201ENST00000384842 89 ntBASIC11.26□□□□□ -0.61
APOBP04114 PRYP5-201ENST00000451909 266 ntBASIC11.26□□□□□ -0.61
APOBP04114 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 AC141586.3-201ENST00000562166 1838 ntBASIC11.26□□□□□ -0.61
APOBP04114 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.26□□□□□ -0.61
APOBP04114 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.26□□□□□ -0.61
APOBP04114 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.26□□□□□ -0.61
APOBP04114 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.26□□□□□ -0.61
APOBP04114 AC005225.4-201ENST00000557330 545 ntBASIC11.26□□□□□ -0.61
APOBP04114 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 AC073592.5-201ENST00000624854 528 ntBASIC11.26□□□□□ -0.61
APOBP04114 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.26□□□□□ -0.61
APOBP04114 KRT18P65-201ENST00000439811 1286 ntBASIC11.26□□□□□ -0.61
APOBP04114 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.26□□□□□ -0.61
APOBP04114 AC087641.1-201ENST00000557561 1021 ntBASIC11.26□□□□□ -0.61
APOBP04114 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 BCAR1-209ENST00000546196 1340 ntBASIC11.26□□□□□ -0.61
APOBP04114 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.25□□□□□ -0.61
APOBP04114 AF228730.6-201ENST00000641497 218 ntBASIC11.25□□□□□ -0.61
APOBP04114 AC084121.3-201ENST00000641716 218 ntBASIC11.25□□□□□ -0.61
APOBP04114 AC092902.6-201ENST00000641783 218 ntBASIC11.25□□□□□ -0.61
APOBP04114 AC105233.6-201ENST00000642093 218 ntBASIC11.25□□□□□ -0.61
APOBP04114 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.25□□□□□ -0.61
APOBP04114 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 GK-202ENST00000378941 458 ntTSL 3 BASIC11.25□□□□□ -0.61
APOBP04114 HLA-V-201ENST00000429037 534 ntBASIC11.25□□□□□ -0.61
APOBP04114 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.25□□□□□ -0.61
APOBP04114 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.25□□□□□ -0.61
APOBP04114 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC11.25□□□□□ -0.61
APOBP04114 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
APOBP04114 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 AC002472.2-201ENST00000442739 958 ntBASIC11.25□□□□□ -0.61
APOBP04114 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.25□□□□□ -0.61
APOBP04114 AL589182.2-201ENST00000619332 1049 ntBASIC11.25□□□□□ -0.61
APOBP04114 AJ011932.1-201ENST00000621707 465 ntBASIC11.25□□□□□ -0.61
APOBP04114 AC005082.1-201ENST00000413042 2259 ntBASIC11.25□□□□□ -0.61
APOBP04114 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
APOBP04114 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOBP04114 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.25□□□□□ -0.61
APOBP04114 GAPDHP21-201ENST00000450301 1010 ntBASIC11.25□□□□□ -0.61
APOBP04114 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.25□□□□□ -0.61
APOBP04114 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC11.25□□□□□ -0.61
APOBP04114 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.24□□□□□ -0.61
APOBP04114 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.24□□□□□ -0.61
APOBP04114 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms