Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CEP290O15078 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CEP290O15078 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.54■□□□□ 0.72
CEP290O15078 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 RHOQP3-201ENST00000437982 621 ntBASIC19.53■□□□□ 0.72
CEP290O15078 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.53■□□□□ 0.72
CEP290O15078 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.53■□□□□ 0.72
CEP290O15078 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.53■□□□□ 0.72
CEP290O15078 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.53■□□□□ 0.72
CEP290O15078 AL596325.1-201ENST00000563991 1082 ntBASIC19.53■□□□□ 0.72
CEP290O15078 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 MTMR9LP-203ENST00000426597 1545 ntBASIC19.53■□□□□ 0.72
CEP290O15078 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.53■□□□□ 0.72
CEP290O15078 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.53■□□□□ 0.72
CEP290O15078 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.53■□□□□ 0.72
CEP290O15078 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.53■□□□□ 0.72
CEP290O15078 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CEP290O15078 KRT18P32-201ENST00000424695 1287 ntBASIC19.53■□□□□ 0.72
CEP290O15078 RN7SL692P-201ENST00000464677 288 ntBASIC19.53■□□□□ 0.72
CEP290O15078 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.53■□□□□ 0.72
CEP290O15078 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.53■□□□□ 0.72
CEP290O15078 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.53■□□□□ 0.72
CEP290O15078 AL589182.2-201ENST00000619332 1049 ntBASIC19.53■□□□□ 0.72
CEP290O15078 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.53■□□□□ 0.72
CEP290O15078 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 AC020907.5-201ENST00000624372 1936 ntBASIC19.53■□□□□ 0.72
CEP290O15078 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CEP290O15078 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 AL024508.2-201ENST00000607749 1894 ntBASIC19.53■□□□□ 0.72
CEP290O15078 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CEP290O15078 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
CEP290O15078 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.52■□□□□ 0.72
CEP290O15078 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.52■□□□□ 0.72
CEP290O15078 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.52■□□□□ 0.72
CEP290O15078 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CEP290O15078 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
CEP290O15078 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.52■□□□□ 0.72
CEP290O15078 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CEP290O15078 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.52■□□□□ 0.72
CEP290O15078 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.52■□□□□ 0.71
CEP290O15078 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CEP290O15078 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.52■□□□□ 0.71
CEP290O15078 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CEP290O15078 NCF1C-201ENST00000438382 1427 ntBASIC19.52■□□□□ 0.71
CEP290O15078 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CEP290O15078 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.51■□□□□ 0.71
CEP290O15078 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.51■□□□□ 0.71
CEP290O15078 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.51■□□□□ 0.71
CEP290O15078 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 AL132655.2-201ENST00000596276 594 ntBASIC19.51■□□□□ 0.71
CEP290O15078 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 IRX1P1-201ENST00000438849 1838 ntBASIC19.51■□□□□ 0.71
CEP290O15078 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 AL121761.2-201ENST00000598007 1648 ntBASIC19.51■□□□□ 0.71
CEP290O15078 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.51■□□□□ 0.71
CEP290O15078 OR7E47P-204ENST00000575924 449 ntBASIC19.51■□□□□ 0.71
CEP290O15078 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CEP290O15078 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CEP290O15078 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CEP290O15078 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CEP290O15078 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CEP290O15078 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CEP290O15078 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CEP290O15078 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CEP290O15078 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms