Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM38O00635 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM38O00635 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM38O00635 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM38O00635 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 AL162741.1-201ENST00000565563 1558 ntBASIC18.29■□□□□ 0.52
TRIM38O00635 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
TRIM38O00635 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM38O00635 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM38O00635 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM38O00635 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM38O00635 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
TRIM38O00635 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.28■□□□□ 0.52
TRIM38O00635 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRIM38O00635 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRIM38O00635 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM38O00635 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 AC112497.1-201ENST00000624824 639 ntBASIC18.28■□□□□ 0.52
TRIM38O00635 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 ANO7L1-203ENST00000602586 1720 ntBASIC18.28■□□□□ 0.52
TRIM38O00635 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM38O00635 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM38O00635 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM38O00635 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM38O00635 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM38O00635 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TRIM38O00635 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
TRIM38O00635 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 HLA-F-220ENST00000434407 884 ntBASIC18.27■□□□□ 0.52
TRIM38O00635 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 RN7SL510P-201ENST00000581311 263 ntBASIC18.27■□□□□ 0.52
TRIM38O00635 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM38O00635 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM38O00635 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM38O00635 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM38O00635 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
TRIM38O00635 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM38O00635 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM38O00635 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TRIM38O00635 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM38O00635 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM38O00635 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM38O00635 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM38O00635 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM38O00635 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM38O00635 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM38O00635 AC246785.2-201ENST00000432512 513 ntBASIC18.26■□□□□ 0.51
TRIM38O00635 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM38O00635 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms