Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC188H7C350 DUTP2-201ENST00000519164 463 ntBASIC18.89■□□□□ 0.61
CCDC188H7C350 RARRES2P10-201ENST00000564312 460 ntBASIC18.89■□□□□ 0.61
CCDC188H7C350 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC188H7C350 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC188H7C350 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC188H7C350 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC188H7C350 AL121761.2-201ENST00000598007 1648 ntBASIC18.89■□□□□ 0.61
CCDC188H7C350 AC133963.1-201ENST00000504166 1679 ntBASIC18.89■□□□□ 0.61
CCDC188H7C350 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ESRRAP1-201ENST00000400596 1257 ntBASIC18.88■□□□□ 0.61
CCDC188H7C350 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC188H7C350 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC188H7C350 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC188H7C350 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC188H7C350 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC188H7C350 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC188H7C350 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC188H7C350 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC188H7C350 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 AC009065.1-201ENST00000564055 1225 ntBASIC18.87■□□□□ 0.61
CCDC188H7C350 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC188H7C350 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 DGCR10-201ENST00000609839 495 ntBASIC18.87■□□□□ 0.61
CCDC188H7C350 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC188H7C350 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC188H7C350 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC188H7C350 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC188H7C350 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC188H7C350 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 AC084018.2-201ENST00000613093 2607 ntBASIC18.86■□□□□ 0.61
CCDC188H7C350 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC188H7C350 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms