Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AC016769.1-201ENST00000409132 1010 ntBASIC12.81□□□□□ -0.36
LINC01546A6NGU7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.81□□□□□ -0.36
LINC01546A6NGU7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC103702.1-201ENST00000548801 2630 ntBASIC12.8□□□□□ -0.36
LINC01546A6NGU7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC092118.2-201ENST00000613495 667 ntBASIC12.8□□□□□ -0.36
LINC01546A6NGU7 HLA-B-256ENST00000639848 1089 ntBASIC12.8□□□□□ -0.36
LINC01546A6NGU7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 AC092368.3-202ENST00000574180 1591 ntBASIC12.8□□□□□ -0.36
LINC01546A6NGU7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01546A6NGU7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 AC034268.1-201ENST00000441047 882 ntBASIC12.79□□□□□ -0.36
LINC01546A6NGU7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms