Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 AL158047.1-201ENST00000445918 881 ntBASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 AC104390.1-201ENST00000555663 520 ntBASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 BCL2-203ENST00000589955 5011 ntBASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AP003071.4-201ENST00000562276 1284 ntBASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AC009065.1-201ENST00000564055 1225 ntBASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 MIR3180-4-201ENST00000582223 153 ntBASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AC092338.2-201ENST00000568827 1415 ntBASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV9S1A1TA0A576 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 AC009053.2-201ENST00000563701 2365 ntBASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 AC112497.1-201ENST00000624824 639 ntBASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV9S1A1TA0A576 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 AL355312.1-201ENST00000407115 2176 ntBASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV9S1A1TA0A576 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 RBM17P1-201ENST00000453646 1190 ntBASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms