Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 POM121L3P-201ENST00000419331 1163 ntBASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 AL121912.1-201ENST00000603683 238 ntBASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
SSX2IPQ9Y2D8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 AL163051.1-201ENST00000569214 1512 ntBASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SSX2IPQ9Y2D8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 NSUN5P1-202ENST00000421140 1535 ntBASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 NSUN5P2-203ENST00000457352 1529 ntBASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC009078.2-202ENST00000463353 338 ntBASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC106795.1-205ENST00000512851 1056 ntBASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms