Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AC116562.2-201ENST00000507042 360 ntBASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 MIR3180-5-201ENST00000583743 153 ntBASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 DGCR10-201ENST00000609839 495 ntBASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AL163051.1-201ENST00000569214 1512 ntBASIC16.22■□□□□ 0.19
COPS3Q9UNS2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COPS3Q9UNS2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 AC036111.1-201ENST00000533973 1582 ntBASIC16.21■□□□□ 0.19
COPS3Q9UNS2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 AC124067.4-201ENST00000519691 2379 ntBASIC16.21■□□□□ 0.19
COPS3Q9UNS2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.21■□□□□ 0.19
COPS3Q9UNS2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COPS3Q9UNS2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
COPS3Q9UNS2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COPS3Q9UNS2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
COPS3Q9UNS2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
COPS3Q9UNS2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COPS3Q9UNS2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms