Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 HLA-F-220ENST00000434407 884 ntBASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 AC079602.3-201ENST00000623931 403 ntBASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
PPARGC1AQ9UBK2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 BICD1-207ENST00000551848 1962 ntBASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 MIR1224-201ENST00000408193 85 ntBASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 NTF6B-201ENST00000591913 560 ntBASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 AL391807.1-203ENST00000604392 2365 ntBASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPARGC1AQ9UBK2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 AL354751.1-201ENST00000412768 1863 ntBASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 HBZP1-201ENST00000354915 429 ntBASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 AL671277.2-201ENST00000458060 996 ntBASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 AL136038.4-201ENST00000603606 1261 ntBASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 AC010331.1-201ENST00000611423 582 ntBASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.92■□□□□ 0.62
PPARGC1AQ9UBK2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms