Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HCG4B-203ENST00000450128 991 ntBASIC19.19■□□□□ 0.66
CHD7Q9P2D1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AP000867.4-201ENST00000641616 219 ntBASIC19.19■□□□□ 0.66
CHD7Q9P2D1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AC006504.4-201ENST00000592118 1568 ntBASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AC093484.2-201ENST00000580996 2166 ntBASIC19.18■□□□□ 0.66
CHD7Q9P2D1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AC005498.2-205ENST00000593218 784 ntBASIC19.18■□□□□ 0.66
CHD7Q9P2D1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AC244107.1-201ENST00000442033 332 ntBASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD7Q9P2D1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 AC011467.4-201ENST00000594891 528 ntBASIC19.17■□□□□ 0.66
CHD7Q9P2D1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 AC097374.2-201ENST00000618617 1306 ntBASIC19.17■□□□□ 0.66
CHD7Q9P2D1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD7Q9P2D1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 AC007967.3-201ENST00000434308 558 ntBASIC19.16■□□□□ 0.66
CHD7Q9P2D1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms