Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 KRT18P1-202ENST00000452408 1331 ntBASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 IGHV3-41-201ENST00000613121 348 ntBASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 AC132938.6-201ENST00000623828 1655 ntBASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 HCG4P8-203ENST00000443049 980 ntBASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 RN7SL606P-201ENST00000472779 293 ntBASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 AC090616.6-201ENST00000582640 721 ntBASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 AL592071.1-201ENST00000611956 408 ntBASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK1Q9NYA1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 TSPY12P-201ENST00000421279 868 ntBASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AC124864.1-201ENST00000623408 392 ntBASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.47■□□□□ 0.39
SPHK1Q9NYA1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 AL096828.2-201ENST00000567259 1965 ntBASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SPHK1Q9NYA1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms