Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
HES4Q9HCC6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.39■□□□□ 0.05
HES4Q9HCC6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 AC093010.1-201ENST00000473625 1624 ntBASIC15.39■□□□□ 0.05
HES4Q9HCC6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.39■□□□□ 0.05
HES4Q9HCC6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HES4Q9HCC6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC138028.4-201ENST00000564984 1845 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC073508.3-201ENST00000619697 1419 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 LIN28AP1-201ENST00000429574 405 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 PVRIG2P-201ENST00000435460 978 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 GCSHP2-201ENST00000560971 527 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC005363.2-201ENST00000618631 242 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 REXO1L9P-201ENST00000604264 2108 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HES4Q9HCC6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.38■□□□□ 0.05
HES4Q9HCC6 FLJ13224-201ENST00000313737 1514 ntBASIC15.38■□□□□ 0.05
HES4Q9HCC6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 NOC2LP2-201ENST00000407594 1944 ntBASIC15.37■□□□□ 0.05
HES4Q9HCC6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 TERF1P1-201ENST00000311003 1181 ntBASIC15.37■□□□□ 0.05
HES4Q9HCC6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HES4Q9HCC6 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 AL157888.1-201ENST00000631930 593 ntBASIC15.37■□□□□ 0.05
HES4Q9HCC6 AL031432.5-201ENST00000641059 760 ntBASIC15.37■□□□□ 0.05
HES4Q9HCC6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.37■□□□□ 0.05
HES4Q9HCC6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms