Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 AKR1C7P-201ENST00000305623 895 ntBASIC18.79■□□□□ 0.6
RNF38Q9H0F5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 AC009078.2-202ENST00000463353 338 ntBASIC18.79■□□□□ 0.6
RNF38Q9H0F5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 MIR5100-201ENST00000579544 119 ntBASIC18.79■□□□□ 0.6
RNF38Q9H0F5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 KRT8P10-201ENST00000450021 1447 ntBASIC18.79■□□□□ 0.6
RNF38Q9H0F5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF38Q9H0F5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 AL160237.2-201ENST00000556165 472 ntBASIC18.78■□□□□ 0.6
RNF38Q9H0F5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF38Q9H0F5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 AC073592.3-201ENST00000625118 1834 ntBASIC18.77■□□□□ 0.6
RNF38Q9H0F5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 AC132938.6-201ENST00000623828 1655 ntBASIC18.77■□□□□ 0.6
RNF38Q9H0F5 AC018445.3-201ENST00000624177 1945 ntBASIC18.77■□□□□ 0.6
RNF38Q9H0F5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 KRT18P65-201ENST00000439811 1286 ntBASIC18.77■□□□□ 0.6
RNF38Q9H0F5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms