Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 AP000593.1-201ENST00000393668 712 ntBASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 AL023284.2-201ENST00000405850 579 ntBASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AMBRA1Q9C0C7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 AC116562.2-201ENST00000507042 360 ntBASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 AP000692.2-201ENST00000608391 879 ntBASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AMBRA1Q9C0C7 GMCL1P1-201ENST00000463439 1581 ntBASIC17.02■□□□□ 0.31
AMBRA1Q9C0C7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
AMBRA1Q9C0C7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AMBRA1Q9C0C7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AC099343.3-201ENST00000605834 2503 ntBASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AL355355.2-201ENST00000442321 338 ntBASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AP003071.4-201ENST00000562276 1284 ntBASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 PHGDH-209ENST00000641074 1780 ntBASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 KRT8P50-201ENST00000562022 1438 ntBASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AMBRA1Q9C0C7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms