Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
NDUFAF3Q9BU61 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 CROCCP1-201ENST00000426910 5675 ntBASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.08□□□□□ -0.16
NDUFAF3Q9BU61 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 MTDHP1-201ENST00000605323 784 ntBASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TFP1-202ENST00000475455 1573 ntBASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 PCDHB17P-201ENST00000539533 2393 ntBASIC14.07□□□□□ -0.16
NDUFAF3Q9BU61 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms