Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 RPS2P32-201ENST00000439199 892 ntBASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 KLF2P3-201ENST00000451977 1087 ntBASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AL132655.2-201ENST00000596276 594 ntBASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AC007064.4-201ENST00000637740 555 ntBASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AL691432.2-201ENST00000607222 2038 ntBASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 AL390754.1-201ENST00000619088 582 ntBASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 KRT8P50-201ENST00000562022 1438 ntBASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRFN3Q9BTN0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AC004945.1-201ENST00000416738 983 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AC107890.1-201ENST00000422478 521 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AL512638.1-201ENST00000457493 794 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 HILS1-202ENST00000545329 423 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 AC023141.13-201ENST00000604991 943 ntBASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
LRFN3Q9BTN0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN3Q9BTN0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN3Q9BTN0 FO538757.1-201ENST00000623083 1397 ntBASIC18.02■□□□□ 0.47
LRFN3Q9BTN0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN3Q9BTN0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.02■□□□□ 0.47
LRFN3Q9BTN0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 PIN1P1-201ENST00000412108 996 ntBASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN3Q9BTN0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms