Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF4Q9BRK5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDF4Q9BRK5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.14■□□□□ 0.97
SDF4Q9BRK5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 MYC-208ENST00000641036 567 ntBASIC21.14■□□□□ 0.97
SDF4Q9BRK5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF4Q9BRK5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 AL357033.4-201ENST00000617703 1807 ntBASIC21.13■□□□□ 0.97
SDF4Q9BRK5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.13■□□□□ 0.97
SDF4Q9BRK5 AC008556.1-201ENST00000610908 2040 ntBASIC21.12■□□□□ 0.97
SDF4Q9BRK5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms