Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCA3Q99758 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCA3Q99758 STOM-202ENST00000347359 870 ntTSL 2 BASIC24.07■■□□□ 1.44
ABCA3Q99758 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCA3Q99758 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
ABCA3Q99758 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCA3Q99758 AL031432.2-201ENST00000566714 459 ntBASIC24.07■■□□□ 1.44
ABCA3Q99758 AL928711.1-201ENST00000570165 459 ntBASIC24.07■■□□□ 1.44
ABCA3Q99758 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC24.07■■□□□ 1.44
ABCA3Q99758 AL161938.1-201ENST00000569833 2180 ntBASIC24.06■■□□□ 1.44
ABCA3Q99758 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCA3Q99758 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCA3Q99758 AL158211.5-201ENST00000623583 2518 ntBASIC24.06■■□□□ 1.44
ABCA3Q99758 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCA3Q99758 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
ABCA3Q99758 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCA3Q99758 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC24.06■■□□□ 1.44
ABCA3Q99758 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.06■■□□□ 1.44
ABCA3Q99758 AC008667.4-201ENST00000607370 168 ntBASIC24.06■■□□□ 1.44
ABCA3Q99758 AC093512.1-201ENST00000617969 520 ntBASIC24.06■■□□□ 1.44
ABCA3Q99758 AL805961.1-202ENST00000641562 540 ntBASIC24.06■■□□□ 1.44
ABCA3Q99758 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCA3Q99758 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 CBR1-202ENST00000399191 838 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 SLC4A1APP2-201ENST00000424054 1259 ntBASIC24.05■■□□□ 1.44
ABCA3Q99758 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC24.05■■□□□ 1.44
ABCA3Q99758 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.05■■□□□ 1.44
ABCA3Q99758 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.05■■□□□ 1.44
ABCA3Q99758 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC24.05■■□□□ 1.44
ABCA3Q99758 AC239800.4-201ENST00000603712 296 ntBASIC24.05■■□□□ 1.44
ABCA3Q99758 AL096865.1-201ENST00000606796 927 ntBASIC24.05■■□□□ 1.44
ABCA3Q99758 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC24.05■■□□□ 1.44
ABCA3Q99758 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC24.05■■□□□ 1.44
ABCA3Q99758 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC24.05■■□□□ 1.44
ABCA3Q99758 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.05■■□□□ 1.44
ABCA3Q99758 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC24.05■■□□□ 1.44
ABCA3Q99758 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
ABCA3Q99758 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ABCA3Q99758 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ABCA3Q99758 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.05■■□□□ 1.44
ABCA3Q99758 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 AC004706.3-202ENST00000621574 984 ntBASIC24.04■■□□□ 1.44
ABCA3Q99758 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC24.04■■□□□ 1.44
ABCA3Q99758 AL049812.1-201ENST00000432563 2267 ntBASIC24.04■■□□□ 1.44
ABCA3Q99758 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
ABCA3Q99758 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC24.04■■□□□ 1.44
ABCA3Q99758 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.04■■□□□ 1.44
ABCA3Q99758 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.04■■□□□ 1.44
ABCA3Q99758 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 AC005498.2-205ENST00000593218 784 ntBASIC24.04■■□□□ 1.44
ABCA3Q99758 MED29-202ENST00000594368 1471 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ABCA3Q99758 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC24.04■■□□□ 1.44
ABCA3Q99758 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
ABCA3Q99758 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC24.03■■□□□ 1.44
ABCA3Q99758 CITED2-204ENST00000618718 901 ntTSL 2 BASIC24.03■■□□□ 1.44
ABCA3Q99758 AL589182.2-201ENST00000619332 1049 ntBASIC24.03■■□□□ 1.44
ABCA3Q99758 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ABCA3Q99758 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.03■■□□□ 1.44
ABCA3Q99758 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ABCA3Q99758 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.02■■□□□ 1.44
ABCA3Q99758 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ABCA3Q99758 AL353593.2-201ENST00000602529 1483 ntBASIC24.02■■□□□ 1.44
ABCA3Q99758 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ABCA3Q99758 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ABCA3Q99758 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms