Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 AC010947.1-201ENST00000623454 693 ntBASIC18.25■□□□□ 0.51
NDNQ99608 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 AC009102.3-201ENST00000623118 1491 ntBASIC18.25■□□□□ 0.51
NDNQ99608 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 PHGDH-209ENST00000641074 1780 ntBASIC18.25■□□□□ 0.51
NDNQ99608 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NDNQ99608 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 AL096828.2-201ENST00000567259 1965 ntBASIC18.24■□□□□ 0.51
NDNQ99608 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NDNQ99608 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.24■□□□□ 0.51
NDNQ99608 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NDNQ99608 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NDNQ99608 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.24■□□□□ 0.51
NDNQ99608 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.24■□□□□ 0.51
NDNQ99608 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.24■□□□□ 0.51
NDNQ99608 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.24■□□□□ 0.51
NDNQ99608 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NDNQ99608 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
NDNQ99608 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NDNQ99608 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
NDNQ99608 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDNQ99608 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NDNQ99608 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.23■□□□□ 0.51
NDNQ99608 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 AL596275.1-201ENST00000423464 877 ntBASIC18.23■□□□□ 0.51
NDNQ99608 AC093827.2-201ENST00000512654 315 ntBASIC18.23■□□□□ 0.51
NDNQ99608 EGLN1P1-201ENST00000531623 762 ntBASIC18.23■□□□□ 0.51
NDNQ99608 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NDNQ99608 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NDNQ99608 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDNQ99608 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDNQ99608 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
NDNQ99608 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NDNQ99608 AC138028.4-201ENST00000564984 1845 ntBASIC18.22■□□□□ 0.51
NDNQ99608 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 MIR149-201ENST00000384879 89 ntBASIC18.22■□□□□ 0.51
NDNQ99608 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.22■□□□□ 0.51
NDNQ99608 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.22■□□□□ 0.51
NDNQ99608 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.22■□□□□ 0.51
NDNQ99608 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.22■□□□□ 0.51
NDNQ99608 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms