Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 AL031432.5-201ENST00000641059 760 ntBASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD1Q96RS6 AC099398.1-201ENST00000567919 2776 ntBASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 AP000593.1-201ENST00000393668 712 ntBASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 KRT18P21-201ENST00000515767 1272 ntBASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.81■□□□□ 0.6
NUDCD1Q96RS6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 TMPOP1-202ENST00000424642 1267 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC117947.1-201ENST00000427448 529 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 FAM210CP-201ENST00000445714 574 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC140113.3-201ENST00000605663 199 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC139887.4-201ENST00000607877 719 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AC006011.2-201ENST00000621313 1158 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 AL023973.1-201ENST00000624619 620 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 KRT8P50-201ENST00000562022 1438 ntBASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms